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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015943529.1_cds_XP_016486657.1_77477
CDS Infomation

[gene=LOC107806898] [db_xref=GeneID:107806898] [protein=aspartic proteinase PCS1-like] [protein_id=XP_016486657.1] [location=14875..16224] [gbkey=CDS]
Sequence

ATGGCTTCTTCTACTAGAGTTTTTGTTCTTCTCCTTCTCATAATCTTCAACTTTCTCTAC
ATCTCAGCACAAAAAACCATTAAACATAAGCCTTTTTCAATGTCATTTCCTCTTACTTCA
ACATCTTTATCACATAACTCTTCTTCTAAAGCTCTTTTTCTTTCTTCCCTTTTGGCTTCT
AATCAAAGAAAACAAGCTCCAAACACAAAAACTGTGTCTAGAATTCCATCTTTGAACTAT
AAATCAACTTTCAAATATTCAATGGCTTTAATTGTTACACTTCCAATAGGGACACCACCA
CAAAATCAACAAATGGTTTTGGACACAGGCAGCCAACTTTCTTGGATTCAATGTCACAAG
AAAATTCCAAAAAGACCCCCACCAACGACGTCGTTTGATCCTTCTTTGTCCTCCACTTTT
TCTGTTCTTCCTTGTACTCATCCTTTATGTAAGCCAAGAATTCCCGATTTTACCCTTCCA
ACTACTTGTGACCAAAATCGCTTGTGCCACTATTCTTACTTTTATGCTGATGGTACTTTA
GCTGAGGGTAATCTTGTCCGTGAAAAAATTACATTTTCACGTTCCCAAAGTACCCCTCCT
TTGATTCTTGGTTGTGCTACGGAGTCCGAAGATGCCGAGGGTATTTTGGGAATGAATCTT
GGACGGTTTTCTTTTGCCTCCCAAGCTAAGGTACAAAAATTCTCATATTGCGTGCCAATT
AGACAAGGTAGCCATGCAGTTAAACCTAGTGGAACATTTTACCTAGGCCAAAACCCTAAT
TCCCATACATTTCAATATATAAATCTTTTGACTTTTCCTCAAAGTCAACGCATGCCAAAT
TTGGATCCACTAGCTTTCACTGTTGGCATGGTAGGGATAAAAATTGGCGGCAAAAAATTA
AACATCTCCGGTAGGGTTTTCCGGCCAAATGCTGGTGGTTCTGGCCAGACGATCATTGAT
TCCGGCACGGAATACACTTTCTTAGTGGAAGAAGCGTACAATAAGGTCAGAGAAGAAATT
GTTAGGTTAGTTGGTCCAAGATTGAAAAAAGGTTACGTTTATGGTGGTGCACTTGACATG
TGCTTCGATAACCGTCCGATGGAAATCGGACGGTTGATAGGTGATATGACATTGCAATTT
GAGAACGGGGTTGAGATTTTGATCAATAAGGAAAGGATGTTGGATGAAGTAGAAGGTGGG
ATCCATTGTGTTGGAATCGGACGGTCAGAATCACTCGGAATAGCAAGCAATATTATTGGT
AATTTCCATCAGCAAAATTTATGGGTAGAATTTGATATGAGAAATCGAAGAGTAGGTTTT
GGCAAAGGAGAGTGTAGTAGGCAAATGTAA

Peptide Sequence

PEP ID

XP_016486657.1
PEP Infomation

PREDICTED: aspartic proteinase PCS1-like [Nicotiana tabacum]
Sequence

MASSTRVFVLLLLIIFNFLYISAQKTIKHKPFSMSFPLTSTSLSHNSSSKALFLSSLLAS
NQRKQAPNTKTVSRIPSLNYKSTFKYSMALIVTLPIGTPPQNQQMVLDTGSQLSWIQCHK
KIPKRPPPTTSFDPSLSSTFSVLPCTHPLCKPRIPDFTLPTTCDQNRLCHYSYFYADGTL
AEGNLVREKITFSRSQSTPPLILGCATESEDAEGILGMNLGRFSFASQAKVQKFSYCVPI
RQGSHAVKPSGTFYLGQNPNSHTFQYINLLTFPQSQRMPNLDPLAFTVGMVGIKIGGKKL
NISGRVFRPNAGGSGQTIIDSGTEYTFLVEEAYNKVREEIVRLVGPRLKKGYVYGGALDM
CFDNRPMEIGRLIGDMTLQFENGVEILINKERMLDEVEGGIHCVGIGRSESLGIASNIIG
NFHQQNLWVEFDMRNRRVGFGKGECSRQM

Transcript Sequence

Gene sequence data has not been registered.